SubtiBank SubtiBank
yazB [2019-06-04 17:13:43]
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yazB [2019-06-04 17:13:43]

similar to transcription regulator (Xre family)
locus
BSU00800
pI
6.59
mw
7.42 kDa
protein length
69 aa Sequence Blast
gene length
210 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

    • Gene

    Coordinates
    87,401 → 87,610

    The protein

    Protein family

  • [SW|Xre family]

    • Expression and Regulation

    Operons

    genes
    [gene|B189AD3E3D18876E1956763182D835A151727392|pabB]-[gene|956E33AAAADB302EB8663E4B75C917242D3AD2C0|pabA]-[gene|865678B10097C40337F5EEA77FF0F6E7BF5358DC|pabC]-[gene|FA9539CB701BC47FD4E849FBA6D7B201B27C6104|sul]-[gene|AAE44B4F73C7C02F7DB3574B6169E0DE46F4B787|folB]-[gene|D2B189C6292ACE1B25658B407C284E9A683EAE5B|folK]-[gene|F373EBC35805DC551E8AFF6FDC7E43D5587C4700|yazB]-[gene|CE45D56BC413555AF4E7914B5307AD967A358452|yacF]-[gene|24CC89DE55B3C19F80B11D106B9FD241174AE3E4|lysS]
    description
    [Pubmed|9084182]

    sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|9084182], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]

    • regulation

  • translation repressed by tryptophan ([protein|E030E80134E9DED6ADBC73C7C7435024CDFD38B9|MtrB]) [Pubmed|9084182]
    • view in new tab

    Biological materials

    Mutant

  • MGNA-B926 (yazB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1925 NBRP B. subtilis, Japan]
  • BKE00800 (Δ[gene|F373EBC35805DC551E8AFF6FDC7E43D5587C4700|yazB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE00800 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AAATCCTTCTTGAGTATAAC, downstream forward: _UP4_TAGAACAAATGAAAGGAGGA
  • BKK00800 (Δ[gene|F373EBC35805DC551E8AFF6FDC7E43D5587C4700|yazB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK00800 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AAATCCTTCTTGAGTATAAC, downstream forward: _UP4_TAGAACAAATGAAAGGAGGA

    • References

  • 9084182,23504016